# This is the template for setting up the Ontorat input conditions. # Any text after # is just for notes and won't be used by Ontorat. [Online URL of the target OWL file (RDF/XML format)] # Note: Local file won't be used by Ontorat for security reason. [Online URL of the data file (Only Excel file (.xls, .xlsx) or tab-delimited text file (.txt)] # Note: Local file won't be used by Ontorat for security reason. Actual data starts from row: 2 [New axioms will be used to] # Note: two options: 1. "generate new classes", # or 2. "edit existing classes with term IDs defined in column A(or another letter)" generate new classes [Annotations] # Note: Use comma to separate annotations 'label' "{$columnA} cell", 'alternative term' "{$columnA}", 'alternative term' "{$columnB}", 'definition' "A {$columnD} that has the characteristics: {$columnC}", 'comment' "Derived from tissue: {$columnG} in animal: {$columnF}.", 'comment' "Originator: {$columnH}", 'comment' "Register: {$columnI}", 'definition editor' "{$columnK}" [Equivalent classes] # Note: Use comma to separate classes [Superclasses] # Note: Use comma to separate classes , 'is in cell line repository' some 'RIKEN Cell Bank' [Terms used to define anntoations, equivalent classes and superclasses] # Note: One line per term AnnotationProperty: Class: 'RIKEN Cell Bank': ObjectProperty: 'is in cell line repository': DataProperty: [Term URIs start with] # Note: provide a prefix ontology URIs http://purl.obolibrary.org/obo/ [Auto-generated term ID] # Note: Prefix like "VO_", number of digits like "7", and start from like "1". Prefix: CLO_ Number of digits: 7 Start from: 50000